|
7 | 7 | <span>view multiscale zarr images online and in notebooks</span> |
8 | 8 | <br> |
9 | 9 | <br> |
10 | | - <a href="https://hms-dbmi.github.io/vizarr/?source=https://minio-dev.openmicroscopy.org/idr/v0.3/idr0062-blin-nuclearsegmentation/6001240.zarr">standalone app</a> . |
| 10 | + <a href="https://biongff.github.io/vizarr/?source=https://minio-dev.openmicroscopy.org/idr/v0.3/idr0062-blin-nuclearsegmentation/6001240.zarr">standalone app</a> . |
11 | 11 | <a href="./python/notebooks/getting_started.ipynb">python api</a> . |
12 | | - <a href="https://colab.research.google.com/github/hms-dbmi/vizarr/blob/main/python/notebooks/mandelbrot.ipynb">open in colab</a> |
| 12 | + <a href="https://colab.research.google.com/github/biongff/vizarr/blob/main/python/notebooks/mandelbrot.ipynb">open in colab</a> |
| 13 | + <br> |
| 14 | + <br> |
| 15 | + <a href="https://github.com/biongff/vizarr/actions/workflows/test.yml"><img src="https://github.com/biongff/vizarr/actions/workflows/test.yml/badge.svg?branch=main" alt="Build and Test"></a> |
| 16 | + <a href="https://github.com/biongff/vizarr/actions/workflows/deploy.yml"><img src="https://github.com/biongff/vizarr/actions/workflows/deploy.yml/badge.svg?branch=main" alt="Deploy"></a> |
| 17 | + <a href="https://github.com/biongff/vizarr/actions/workflows/release.yml"><img src="https://github.com/biongff/vizarr/actions/workflows/release.yml/badge.svg?branch=main" alt="Release"></a> |
| 18 | + <a href="https://github.com/biongff/vizarr/actions/workflows/npm-publish.yml"><img src="https://github.com/biongff/vizarr/actions/workflows/npm-publish.yml/badge.svg" alt="Publish"></a> |
| 19 | + <br> |
| 20 | + <br> |
| 21 | + <a href="https://www.npmjs.com/package/@biongff/vizarr"><img src="https://img.shields.io/npm/v/%40biongff%2Fvizarr" alt="npm version"></a> |
| 22 | + <a href="https://codecov.io/gh/biongff/vizarr"><img src="https://codecov.io/gh/biongff/vizarr/graph/badge.svg" alt="Coverage"></a> |
| 23 | + <a href="https://www.npmjs.com/package/@biongff/vizarr"><img src="https://img.shields.io/npm/dm/%40biongff%2Fvizarr" alt="npm downloads"></a> |
| 24 | + <a href="https://github.com/biongff/vizarr/blob/main/LICENSE"><img src="https://img.shields.io/github/license/biongff/vizarr" alt="License"></a> |
13 | 25 | </p> |
14 | 26 | </samp> |
15 | 27 | </p> |
|
20 | 32 |
|
21 | 33 | - ⚡ **GPU accelerated rendering** with [Viv](https://github.com/hms-dbmi/viv) |
22 | 34 | - 💻 Purely **client-side** zarr access with [zarrita.js](https://github.com/manzt/zarrita.js) |
23 | | -- 🌎 A **standalone [web app](https://hms-dbmi/vizarr)** for viewing entirely in the browser. |
| 35 | +- 🌎 A **standalone [web app](https://biongff.github.io/vizarr)** for viewing entirely in the browser. |
24 | 36 | - 🐍 An [anywidget](https://github.com/manzt/anywidget) **Python API** for |
25 | 37 | programmatic control in notebooks. |
26 | 38 | - 📦 Supports any `zarr-python` [store](https://zarr.readthedocs.io/en/stable/api/storage.html) |
|
36 | 48 |
|
37 | 49 | ### 1. Standalone Web App |
38 | 50 |
|
39 | | -You can use the standalone web app by copying and pasting a URL to a Zarr store as the `?source` query parameter in the [web app](https://hms-dbmi.github.io/vizarr). |
| 51 | +You can use the standalone web app by copying and pasting a URL to a Zarr store as the `?source` query parameter in the [web app](https://biongff.github.io/vizarr). |
40 | 52 |
|
41 | 53 | For example, to view [this dataset](https://minio-dev.openmicroscopy.org/idr/v0.3/idr0062-blin-nuclearsegmentation/6001240.zarr) from the IDR, navigate to the following URL: |
42 | 54 |
|
43 | 55 | ``` |
44 | | -https://hms-dbmi.github.io/vizarr/?source=https://minio-dev.openmicroscopy.org/idr/v0.3/idr0062-blin-nuclearsegmentation/6001240.zarr |
| 56 | +https://biongff.github.io/vizarr/?source=https://minio-dev.openmicroscopy.org/idr/v0.3/idr0062-blin-nuclearsegmentation/6001240.zarr |
45 | 57 | ``` |
46 | 58 |
|
47 | 59 | ### 2. Python API |
|
0 commit comments