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Bump up version number. Skip the read length check if the input is from stdin
1 parent 6cc0707 commit 99583d7

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Lines changed: 3 additions & 2 deletions

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VERSION

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -1 +1 @@
1-
2.2.1
1+
2.2.2

hisat2

Lines changed: 2 additions & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -293,7 +293,8 @@ Info(" Binary args:\n[ @ht2_args ]\n");
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my @read_files = (scalar(@unps) > 0) ? @unps : @mate1s;
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if ((scalar(@read_files) > 0)
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&& ($seq_in_args == 0)
296-
&& ($skip_read_stat == 0)) {
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&& ($skip_read_stat == 0)
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&& ($read_files[0] ne '-')) {
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Info("Check read length: $read_files[0]\n");
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my $cmd = "'$read_stat_prog' $read_files[0]";
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my $read_len_str = "";

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