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@noaa-nwfsc Northwest Fisheries Science Center

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    43 repositories

    • FishSET

      Public
      FishSET (fisheries spatial economics toolbox) includes tools for spatial data analysis, running location choice models, and simulating policy scenarios.
      economicsr-packagelocation-choice-model
      economicsr-packagelocation-choice-modelnwfsc-fram
      R
      •
      Other
      •4•9•103•0•Updated Apr 22, 2026Apr 22, 2026

    • SMORES

      Public
      Repository to house the materials to develop the Suitability Modeling for Offshore Resources and Energy Siting (SMORES) Shiny Application.
      R
      •
      Apache License 2.0
      •0•0•2•0•Updated Apr 16, 2026Apr 16, 2026

    • NWFSC-PAM-Lab-Manual

      Public
      Lab Manual for NWFSC Marine Mammal Passive Acoustic Monitoring
      JavaScript
      •
      Creative Commons Zero v1.0 Universal
      •0•0•3•0•Updated Apr 7, 2026Apr 7, 2026

    • fisheye_perfmets

      Public
      HTML
      •0•0•0•0•Updated Apr 7, 2026Apr 7, 2026

    • fisheye_whiting

      Public
      Fisheye Whiting App
      HTML
      •0•0•0•0•Updated Apr 1, 2026Apr 1, 2026

    • salmon_river_wq

      Public
      Water quality data (stream temperature and water depth) for sites throughout the Salmon River basin in Idaho
      R
      •
      Apache License 2.0
      •1•0•0•0•Updated Mar 27, 2026Mar 27, 2026

    • psc-seawater-tolerance

      Public
      Analysis of Puget Sound Chinook seawater tolerance
      R
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Mar 17, 2026Mar 17, 2026

    • srkw-status

      Public
      Repo for archiving code related to SRKW population projections, etc
      esar-packagemarine-mammals
      esar-packagemarine-mammalsstatus-reviewnwfsc-cbsrkwkiller-whale
      R
      •
      GNU General Public License v3.0
      •0•3•0•0•Updated Feb 3, 2026Feb 3, 2026

    • Skagit-IBM

      Public
      C++
      •
      Other
      •1•0•0•0•Updated Jan 31, 2026Jan 31, 2026

    • fisheye_purcprod

      Public
      R
      •
      Other
      •0•0•0•0•Updated Jan 21, 2026Jan 21, 2026

    • VMS-pipeline

      Public
      This repo matches VMS location data with fishticket information to help identify fishing locations.
      vmsfisheries-footprints
      vmsfisheries-footprints
      R
      •
      Other
      •0•2•18•0•Updated Jan 15, 2026Jan 15, 2026

    • vermilion-sunset-gtseq

      Public
      Species ID project on Vermilion/Sunset Rockfish - 2004-2024
      nwfsc-cb-genetics
      nwfsc-cb-genetics
      R
      •
      Apache License 2.0
      •1•0•0•0•Updated Dec 4, 2025Dec 4, 2025

    • CMISST

      Public
      Covariance Map Index of Sea Surface Temperature
      R
      •
      Apache License 2.0
      •0•2•0•0•Updated Nov 13, 2025Nov 13, 2025

    • eulachonGSI

      Public
      to hold code associated with eulachon GSI project
      nwfsc-cb-genetics
      nwfsc-cb-genetics
      R
      •
      Apache License 2.0
      •2•1•0•0•Updated Oct 10, 2025Oct 10, 2025

    • fisheye_all

      Public
      SCSS
      •0•0•0•0•Updated Sep 5, 2025Sep 5, 2025

    • Salmon_trends_2025

      Public
      Data code used for Ford et al. 2025 Abundance trends of Pacific salmon during a quarter century of ESA protection
      R
      •0•0•0•0•Updated Aug 24, 2025Aug 24, 2025

    • Wenatchee-RRS

      Public
      Code and results for Wenatchee River spring Chinook relatively reproductive success project
      nwfsc-cb-genetics
      nwfsc-cb-genetics
      HTML
      •
      Apache License 2.0
      •0•0•0•0•Updated Aug 13, 2025Aug 13, 2025

    • spatial-age-models

      Public
      R
      •
      GNU General Public License v3.0
      •1•1•2•0•Updated Jul 14, 2025Jul 14, 2025

    • microhaplotyping_speciesID

      Public
      Repo for rockfish species ID work using genetics
      nwfsc-cb-genetics
      nwfsc-cb-genetics
      HTML
      •
      Apache License 2.0
      •1•0•0•0•Updated Jul 7, 2025Jul 7, 2025

    • hood-canal-steelhead-redds

      Public
      Analysis of Hood Canal steelhead supplementation experiment
      R
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Jul 7, 2025Jul 7, 2025

    • vermilion_sunset_epigenetics

      Public
      Working repository for analysis of epigenetic data from Vermilion and Sunset rockfish
      nwfsc-cb-genetics
      nwfsc-cb-genetics
      R
      •
      Apache License 2.0
      •2•0•0•0•Updated Jun 27, 2025Jun 27, 2025

    • CB_Genetics_Landing_Page

      Public
      Landing page for the Conservation Biology Molecular Genetics team. Links to repos for CB Genetics projects and other resources.
      nwfsc-cb-genetics
      nwfsc-cb-genetics
      Lua
      •
      Creative Commons Zero v1.0 Universal
      •0•3•0•0•Updated May 2, 2025May 2, 2025

    • Streamflow-Means-NWM

      Public
      Repo to describe creating a package of processed streamflow means for Morgan Bond
      Jupyter Notebook
      •2•0•0•1•Updated Apr 2, 2025Apr 2, 2025

    • nws-data-processing

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Mar 28, 2025Mar 28, 2025

    • zoid

      Public
      Trinomial mixture models in Stan, for fitting to compositional data with 0s
      cranstanr-package
      cranstanr-packagemixture-modelsnwfsc-cb
      C++
      •
      Other
      •3•9•1•0•Updated Mar 17, 2025Mar 17, 2025

    • noaa-nwfsc.github.io

      Public template
      Landing page for the noaa-nwfsc GitHub Enterprise Cloud
      CSS
      •
      Creative Commons Zero v1.0 Universal
      •0•0•0•0•Updated Mar 5, 2025Mar 5, 2025

    • test-repo

      Public
      0•0•0•0•Updated Mar 4, 2025Mar 4, 2025

    • NOAA-Omics-pubs

      Public
      NOAA Omics publication plotting
      R
      •
      Creative Commons Zero v1.0 Universal
      •0•1•0•0•Updated Mar 3, 2025Mar 3, 2025

    • VRAP

      Public
      R package for the VRAP program
      r-packagesalmonprotected-species
      r-packagesalmonprotected-species
      R
      •0•0•0•0•Updated Nov 23, 2024Nov 23, 2024

    • satf

      Public
      R package that contains general tables and figures such as diagnostics plots, standard objects in an assessment report, and other important visualizations to in…
      r-package
      r-package
      R
      •
      Other
      •5•0•0•0•Updated Nov 14, 2024Nov 14, 2024
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